Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC008040.2-201ENST00000461049 708 ntBASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 PRSS44-201ENST00000515154 1146 ntBASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 RN7SL471P-201ENST00000580476 299 ntBASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 AL445675.2-201ENST00000620291 557 ntBASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCAL1Q9NZC9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 KRT18P29-201ENST00000397031 1267 ntBASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 SLC25A6P5-201ENST00000435663 894 ntBASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
SMARCAL1Q9NZC9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SMARCAL1Q9NZC9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 PRORSD1P-202ENST00000563365 2154 ntBASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 PHGDH-209ENST00000641074 1780 ntBASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMARCAL1Q9NZC9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms