Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FBXO28Q9NVF7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 AC113404.2-201ENST00000507884 177 ntBASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FBXO28Q9NVF7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 MRPL3P1-201ENST00000400109 1033 ntBASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
FBXO28Q9NVF7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.08■□□□□ 0.96
FBXO28Q9NVF7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FBXO28Q9NVF7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
FBXO28Q9NVF7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FBXO28Q9NVF7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
FBXO28Q9NVF7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
FBXO28Q9NVF7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
FBXO28Q9NVF7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
FBXO28Q9NVF7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 AF238378.1-201ENST00000526806 358 ntBASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 SLC25A6P4-201ENST00000586535 553 ntBASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 AL121912.1-201ENST00000603683 238 ntBASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.07■□□□□ 0.96
FBXO28Q9NVF7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 AC005336.2-201ENST00000593183 939 ntBASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 AIRN-201ENST00000601203 4374 ntBASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FBXO28Q9NVF7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FBXO28Q9NVF7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms