Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.27■■□□□ 1
VAT1LQ9HCJ6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
VAT1LQ9HCJ6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
VAT1LQ9HCJ6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 AC024563.2-201ENST00000603282 481 ntBASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.26■□□□□ 0.99
VAT1LQ9HCJ6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 KRT18P48-201ENST00000434763 852 ntBASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 AP003733.1-201ENST00000491725 852 ntBASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
VAT1LQ9HCJ6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VAT1LQ9HCJ6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 AC005332.3-201ENST00000589904 676 ntBASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 AC069148.1-201ENST00000608741 768 ntBASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms