Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 AC233702.5-201ENST00000584107 538 ntBASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TUBB1Q9H4B7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 AL049637.2-201ENST00000641778 930 ntBASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 AC020916.1-201ENST00000587762 1774 ntBASIC17.71■□□□□ 0.43
TUBB1Q9H4B7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TUBB1Q9H4B7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 AC009102.3-201ENST00000623118 1491 ntBASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 AC012618.2-201ENST00000428058 849 ntBASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 GCSHP5-201ENST00000443090 522 ntBASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 AL023803.3-201ENST00000615559 522 ntBASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 AC012317.2-201ENST00000623305 2251 ntBASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 AIRN-201ENST00000601203 4374 ntBASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TUBB1Q9H4B7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms