Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 HTR7P1-201ENST00000538670 1336 ntBASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 AC134043.2-201ENST00000624206 2238 ntBASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THUMPD3Q9BV44 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 AL445675.2-201ENST00000620291 557 ntBASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THUMPD3Q9BV44 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.58■□□□□ 0.41
THUMPD3Q9BV44 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
THUMPD3Q9BV44 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THUMPD3Q9BV44 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
THUMPD3Q9BV44 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
THUMPD3Q9BV44 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.58■□□□□ 0.41
THUMPD3Q9BV44 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
THUMPD3Q9BV44 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THUMPD3Q9BV44 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 AL158047.1-201ENST00000445918 881 ntBASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 AC098590.1-201ENST00000468126 897 ntBASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 AC138028.4-201ENST00000564984 1845 ntBASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 AC020916.1-201ENST00000587762 1774 ntBASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.58■□□□□ 0.4
THUMPD3Q9BV44 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THUMPD3Q9BV44 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms