Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 MESTP1-201ENST00000404287 994 ntBASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHANK2-AS3Q9BTD1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 AL096828.2-201ENST00000567259 1965 ntBASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 KRT8P50-201ENST00000562022 1438 ntBASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 LINC00896-202ENST00000609602 2128 ntBASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 DGCR10-201ENST00000609839 495 ntBASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHANK2-AS3Q9BTD1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 AL135905.2-201ENST00000584934 1404 ntBASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.15□□□□□ -0.14
SHANK2-AS3Q9BTD1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms