Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 MIR4674-201ENST00000582457 87 ntBASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPPED1Q9BRF8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 AL163051.1-201ENST00000569214 1512 ntBASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 MIR149-201ENST00000384879 89 ntBASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 MIR3180-5-201ENST00000583743 153 ntBASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 DGCR10-201ENST00000609839 495 ntBASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.27■□□□□ 0.36
CPPED1Q9BRF8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 AC012317.2-201ENST00000623305 2251 ntBASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.27■□□□□ 0.35
CPPED1Q9BRF8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 AC009102.3-201ENST00000623118 1491 ntBASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 AC093010.1-201ENST00000473625 1624 ntBASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 AC036111.1-201ENST00000533973 1582 ntBASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPPED1Q9BRF8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPPED1Q9BRF8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms