Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF559Q9BR84 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF559Q9BR84 ABALON-201ENST00000629058 1903 ntBASIC17.06■□□□□ 0.32
ZNF559Q9BR84 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 AC008556.1-201ENST00000610908 2040 ntBASIC17.05■□□□□ 0.32
ZNF559Q9BR84 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 MCCD1P1-208ENST00000445732 328 ntBASIC17.05■□□□□ 0.32
ZNF559Q9BR84 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 CA15P1-201ENST00000481698 905 ntBASIC17.05■□□□□ 0.32
ZNF559Q9BR84 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF559Q9BR84 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.04■□□□□ 0.32
ZNF559Q9BR84 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 MYLKP1-201ENST00000509077 1580 ntBASIC17.04■□□□□ 0.32
ZNF559Q9BR84 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 AL023284.2-201ENST00000405850 579 ntBASIC17.04■□□□□ 0.32
ZNF559Q9BR84 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 AC092647.4-201ENST00000457211 535 ntBASIC17.04■□□□□ 0.32
ZNF559Q9BR84 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ZNF559Q9BR84 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.03■□□□□ 0.32
ZNF559Q9BR84 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 MIR564-202ENST00000385049 94 ntBASIC17.03■□□□□ 0.32
ZNF559Q9BR84 AP000593.1-201ENST00000393668 712 ntBASIC17.03■□□□□ 0.32
ZNF559Q9BR84 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 FAM87A-204ENST00000613235 858 ntBASIC17.03■□□□□ 0.32
ZNF559Q9BR84 AC116562.4-202ENST00000641738 218 ntBASIC17.03■□□□□ 0.32
ZNF559Q9BR84 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF559Q9BR84 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms