Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.24■□□□□ 0.67
SMOQ99835 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.24■□□□□ 0.67
SMOQ99835 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMOQ99835 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMOQ99835 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.24■□□□□ 0.67
SMOQ99835 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMOQ99835 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMOQ99835 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMOQ99835 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMOQ99835 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.23■□□□□ 0.67
SMOQ99835 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.23■□□□□ 0.67
SMOQ99835 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.23■□□□□ 0.67
SMOQ99835 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SMOQ99835 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.23■□□□□ 0.67
SMOQ99835 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.23■□□□□ 0.67
SMOQ99835 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 AP002383.4-201ENST00000442518 975 ntBASIC19.23■□□□□ 0.67
SMOQ99835 TSSC2-201ENST00000450217 709 ntBASIC19.23■□□□□ 0.67
SMOQ99835 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.23■□□□□ 0.67
SMOQ99835 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.23■□□□□ 0.67
SMOQ99835 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMOQ99835 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.23■□□□□ 0.67
SMOQ99835 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 ESPNP-201ENST00000270691 2015 ntBASIC19.23■□□□□ 0.67
SMOQ99835 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMOQ99835 GMCL1P1-201ENST00000463439 1581 ntBASIC19.23■□□□□ 0.67
SMOQ99835 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SMOQ99835 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMOQ99835 AL353692.3-201ENST00000407031 1396 ntBASIC19.22■□□□□ 0.67
SMOQ99835 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.22■□□□□ 0.67
SMOQ99835 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SMOQ99835 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMOQ99835 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMOQ99835 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMOQ99835 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMOQ99835 ATP5G2P1-201ENST00000433580 426 ntBASIC19.22■□□□□ 0.67
SMOQ99835 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.22■□□□□ 0.67
SMOQ99835 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMOQ99835 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMOQ99835 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SMOQ99835 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SMOQ99835 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.22■□□□□ 0.67
SMOQ99835 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMOQ99835 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.22■□□□□ 0.67
SMOQ99835 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMOQ99835 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
SMOQ99835 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.21■□□□□ 0.67
SMOQ99835 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.21■□□□□ 0.67
SMOQ99835 AC113404.2-201ENST00000507884 177 ntBASIC19.21■□□□□ 0.67
SMOQ99835 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.21■□□□□ 0.67
SMOQ99835 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.21■□□□□ 0.67
SMOQ99835 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMOQ99835 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMOQ99835 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.21■□□□□ 0.67
SMOQ99835 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMOQ99835 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMOQ99835 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.2■□□□□ 0.66
SMOQ99835 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms