Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.2■□□□□ 0.02
S1PR3Q99500 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
S1PR3Q99500 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.2■□□□□ 0.02
S1PR3Q99500 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
S1PR3Q99500 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 CROCCP1-201ENST00000426910 5675 ntBASIC15.2■□□□□ 0.02
S1PR3Q99500 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 AL355075.4-201ENST00000554988 638 ntBASIC15.2■□□□□ 0.02
S1PR3Q99500 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.2■□□□□ 0.02
S1PR3Q99500 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.2■□□□□ 0.02
S1PR3Q99500 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.2■□□□□ 0.02
S1PR3Q99500 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
S1PR3Q99500 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
S1PR3Q99500 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
S1PR3Q99500 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
S1PR3Q99500 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
S1PR3Q99500 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
S1PR3Q99500 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 AL499627.1-201ENST00000569373 2188 ntBASIC15.19■□□□□ 0.02
S1PR3Q99500 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.19■□□□□ 0.02
S1PR3Q99500 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.19■□□□□ 0.02
S1PR3Q99500 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.19■□□□□ 0.02
S1PR3Q99500 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.19■□□□□ 0.02
S1PR3Q99500 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.19■□□□□ 0.02
S1PR3Q99500 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.19■□□□□ 0.02
S1PR3Q99500 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.19■□□□□ 0.02
S1PR3Q99500 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
S1PR3Q99500 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
S1PR3Q99500 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
S1PR3Q99500 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
S1PR3Q99500 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
S1PR3Q99500 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
S1PR3Q99500 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
S1PR3Q99500 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 AC008556.1-201ENST00000610908 2040 ntBASIC15.18■□□□□ 0.02
S1PR3Q99500 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.18■□□□□ 0.02
S1PR3Q99500 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
S1PR3Q99500 AP000593.1-201ENST00000393668 712 ntBASIC15.18■□□□□ 0.02
S1PR3Q99500 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.18■□□□□ 0.02
S1PR3Q99500 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
S1PR3Q99500 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.18■□□□□ 0.02
S1PR3Q99500 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 OR6D1P-203ENST00000641209 4860 ntBASIC15.18■□□□□ 0.02
S1PR3Q99500 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
S1PR3Q99500 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
S1PR3Q99500 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
S1PR3Q99500 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.18■□□□□ 0.02
S1PR3Q99500 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
S1PR3Q99500 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms