Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSPG4P5Q96PW8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 ATP5G1P1-201ENST00000448724 379 ntBASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 MIR3917-201ENST00000580971 93 ntBASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 AL023973.1-201ENST00000624619 620 ntBASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 AC092865.7-201ENST00000641832 219 ntBASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CSPG4P5Q96PW8 NOC2LP1-202ENST00000452600 2235 ntBASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 PHGDH-209ENST00000641074 1780 ntBASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 AC073508.3-201ENST00000619697 1419 ntBASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 AL137013.1-201ENST00000432946 1228 ntBASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 GCSHP2-201ENST00000560971 527 ntBASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CSPG4P5Q96PW8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 LINC01126-201ENST00000623515 1646 ntBASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CSPG4P5Q96PW8 AL024508.2-201ENST00000607749 1894 ntBASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 AC005521.1-201ENST00000393351 872 ntBASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CSPG4P5Q96PW8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms