Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 AC034236.2-201ENST00000606662 1610 ntBASIC17.57■□□□□ 0.4
SLC46A1Q96NT5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 TSPY12P-201ENST00000421279 868 ntBASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 AF238378.1-201ENST00000526806 358 ntBASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 AC024563.2-201ENST00000603282 481 ntBASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 AL049812.1-201ENST00000432563 2267 ntBASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 NSUN5P1-202ENST00000421140 1535 ntBASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 NSUN5P2-203ENST00000457352 1529 ntBASIC17.56■□□□□ 0.4
SLC46A1Q96NT5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 PMS2P1-201ENST00000431037 1228 ntBASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A1Q96NT5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 AC006333.2-201ENST00000607957 2099 ntBASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 AP001005.1-201ENST00000571755 1248 ntBASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 AF228730.7-201ENST00000641842 219 ntBASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 KRT8P32-201ENST00000512863 1461 ntBASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC46A1Q96NT5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC46A1Q96NT5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms