Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC104692.2-201ENST00000603054 253 ntBASIC18.41■□□□□ 0.54
SIPA1Q96FS4 AL353801.3-201ENST00000609898 542 ntBASIC18.41■□□□□ 0.54
SIPA1Q96FS4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIPA1Q96FS4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.41■□□□□ 0.54
SIPA1Q96FS4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIPA1Q96FS4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SIPA1Q96FS4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.41■□□□□ 0.54
SIPA1Q96FS4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 MINOS1P3-201ENST00000457048 203 ntBASIC18.4■□□□□ 0.54
SIPA1Q96FS4 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 AP005901.3-202ENST00000581653 237 ntBASIC18.4■□□□□ 0.54
SIPA1Q96FS4 AC008687.5-201ENST00000593746 558 ntBASIC18.4■□□□□ 0.54
SIPA1Q96FS4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 AL049812.1-201ENST00000432563 2267 ntBASIC18.4■□□□□ 0.54
SIPA1Q96FS4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SIPA1Q96FS4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SIPA1Q96FS4 AC009102.3-201ENST00000623118 1491 ntBASIC18.39■□□□□ 0.54
SIPA1Q96FS4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SIPA1Q96FS4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SIPA1Q96FS4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 KRT16P4-201ENST00000453883 522 ntBASIC18.39■□□□□ 0.53
SIPA1Q96FS4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SIPA1Q96FS4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 NUS1P2-201ENST00000417358 873 ntBASIC18.38■□□□□ 0.53
SIPA1Q96FS4 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 AC091607.1-201ENST00000490318 1060 ntBASIC18.38■□□□□ 0.53
SIPA1Q96FS4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.38■□□□□ 0.53
SIPA1Q96FS4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms