Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTP4Q96DX8 LINC01126-201ENST00000623515 1646 ntBASIC18.74■□□□□ 0.59
RTP4Q96DX8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.74■□□□□ 0.59
RTP4Q96DX8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.73■□□□□ 0.59
RTP4Q96DX8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AC092865.7-201ENST00000641832 219 ntBASIC18.73■□□□□ 0.59
RTP4Q96DX8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AC099343.3-201ENST00000605834 2503 ntBASIC18.73■□□□□ 0.59
RTP4Q96DX8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 GNAS-203ENST00000306120 1878 ntBASIC18.73■□□□□ 0.59
RTP4Q96DX8 AL024508.2-201ENST00000607749 1894 ntBASIC18.73■□□□□ 0.59
RTP4Q96DX8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTP4Q96DX8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RTP4Q96DX8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 CYP2D8P-201ENST00000433633 1490 ntBASIC18.72■□□□□ 0.59
RTP4Q96DX8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 LINC01568-207ENST00000641790 1380 ntBASIC18.72■□□□□ 0.59
RTP4Q96DX8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 INGX-201ENST00000359239 846 ntBASIC18.72■□□□□ 0.59
RTP4Q96DX8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 NAPSB-206ENST00000562112 1266 ntBASIC18.72■□□□□ 0.59
RTP4Q96DX8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTP4Q96DX8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.72■□□□□ 0.59
RTP4Q96DX8 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms