Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.3■□□□□ 0.52
CLDN23Q96B33 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 AC002347.1-201ENST00000569543 541 ntBASIC18.3■□□□□ 0.52
CLDN23Q96B33 NKAPP1-205ENST00000585790 367 ntBASIC18.3■□□□□ 0.52
CLDN23Q96B33 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 MTDHP4-201ENST00000600287 670 ntBASIC18.3■□□□□ 0.52
CLDN23Q96B33 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 AL137060.1-201ENST00000618151 2648 ntBASIC18.3■□□□□ 0.52
CLDN23Q96B33 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN23Q96B33 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN23Q96B33 AL024508.2-201ENST00000607749 1894 ntBASIC18.29■□□□□ 0.52
CLDN23Q96B33 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 AP002414.3-201ENST00000589352 1468 ntBASIC18.28■□□□□ 0.52
CLDN23Q96B33 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 DNAJB3-202ENST00000449667 1266 ntBASIC18.28■□□□□ 0.52
CLDN23Q96B33 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 MTDHP5-201ENST00000598980 586 ntBASIC18.28■□□□□ 0.52
CLDN23Q96B33 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN23Q96B33 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN23Q96B33 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN23Q96B33 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN23Q96B33 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN23Q96B33 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN23Q96B33 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN23Q96B33 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN23Q96B33 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN23Q96B33 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN23Q96B33 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 AC009947.1-201ENST00000444350 727 ntBASIC18.27■□□□□ 0.52
CLDN23Q96B33 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN23Q96B33 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CLDN23Q96B33 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN23Q96B33 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
CLDN23Q96B33 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CLDN23Q96B33 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.27■□□□□ 0.51
CLDN23Q96B33 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.51
CLDN23Q96B33 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN23Q96B33 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms