Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 AC004951.3-201ENST00000418645 1148 ntBASIC17.69■□□□□ 0.42
VPS33AQ96AX1 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.69■□□□□ 0.42
VPS33AQ96AX1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS33AQ96AX1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 AC012313.1-201ENST00000593393 3059 ntBASIC17.68■□□□□ 0.42
VPS33AQ96AX1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 AC133681.1-201ENST00000465482 601 ntBASIC17.68■□□□□ 0.42
VPS33AQ96AX1 AP002982.1-201ENST00000492365 877 ntBASIC17.68■□□□□ 0.42
VPS33AQ96AX1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 AC110285.5-201ENST00000611501 352 ntBASIC17.68■□□□□ 0.42
VPS33AQ96AX1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VPS33AQ96AX1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 AC099343.3-201ENST00000605834 2503 ntBASIC17.67■□□□□ 0.42
VPS33AQ96AX1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 AC008040.2-201ENST00000461049 708 ntBASIC17.67■□□□□ 0.42
VPS33AQ96AX1 CKBP1-201ENST00000565489 1086 ntBASIC17.67■□□□□ 0.42
VPS33AQ96AX1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.67■□□□□ 0.42
VPS33AQ96AX1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms