Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMIM4Q8WVI0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 HTR7P1-201ENST00000538670 1336 ntBASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 AC016769.1-201ENST00000409132 1010 ntBASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 AL121829.2-201ENST00000620908 328 ntBASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SMIM4Q8WVI0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 KRT18P55-202ENST00000578578 1546 ntBASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SMIM4Q8WVI0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMIM4Q8WVI0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 POU5F1P3-201ENST00000428824 1078 ntBASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMIM4Q8WVI0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms