Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 AC005332.1-201ENST00000577698 1310 ntBASIC22.66■■□□□ 1.22
SSH3Q8TE77 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.66■■□□□ 1.22
SSH3Q8TE77 RNF126P1-202ENST00000569893 925 ntBASIC22.66■■□□□ 1.22
SSH3Q8TE77 AC087388.1-201ENST00000571370 1112 ntBASIC22.66■■□□□ 1.22
SSH3Q8TE77 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SSH3Q8TE77 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 AC135050.7-201ENST00000624508 2218 ntBASIC22.66■■□□□ 1.22
SSH3Q8TE77 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.66■■□□□ 1.22
SSH3Q8TE77 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SSH3Q8TE77 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
SSH3Q8TE77 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SSH3Q8TE77 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SSH3Q8TE77 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SSH3Q8TE77 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
SSH3Q8TE77 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SSH3Q8TE77 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SSH3Q8TE77 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.64■■□□□ 1.22
SSH3Q8TE77 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SSH3Q8TE77 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SSH3Q8TE77 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SSH3Q8TE77 AL645929.1-201ENST00000420084 975 ntBASIC22.64■■□□□ 1.21
SSH3Q8TE77 KRT18P48-201ENST00000434763 852 ntBASIC22.64■■□□□ 1.21
SSH3Q8TE77 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SSH3Q8TE77 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 AC116407.4-201ENST00000623319 1061 ntBASIC22.64■■□□□ 1.21
SSH3Q8TE77 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 NEFHP1-201ENST00000412845 2629 ntBASIC22.64■■□□□ 1.21
SSH3Q8TE77 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SSH3Q8TE77 AC093010.1-201ENST00000473625 1624 ntBASIC22.64■■□□□ 1.21
SSH3Q8TE77 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SSH3Q8TE77 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 AL354751.1-201ENST00000412768 1863 ntBASIC22.63■■□□□ 1.21
SSH3Q8TE77 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 IGHGP-201ENST00000390555 1178 ntBASIC22.63■■□□□ 1.21
SSH3Q8TE77 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 LINC00167-201ENST00000530583 1419 ntBASIC22.63■■□□□ 1.21
SSH3Q8TE77 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SSH3Q8TE77 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.63■■□□□ 1.21
SSH3Q8TE77 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SSH3Q8TE77 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.62■■□□□ 1.21
SSH3Q8TE77 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SSH3Q8TE77 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SSH3Q8TE77 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
SSH3Q8TE77 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SSH3Q8TE77 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SSH3Q8TE77 ARMC10P1-201ENST00000313754 855 ntBASIC22.62■■□□□ 1.21
SSH3Q8TE77 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.62■■□□□ 1.21
SSH3Q8TE77 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.62■■□□□ 1.21
SSH3Q8TE77 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.62■■□□□ 1.21
SSH3Q8TE77 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms