Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 AC254562.1-201ENST00000417586 456 ntBASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 AC108073.2-201ENST00000464002 357 ntBASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ALMS1Q8TCU4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 ELK2BP-201ENST00000415014 1224 ntBASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 GABARAPL3-202ENST00000624044 1851 ntBASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 AC068587.9-201ENST00000641814 219 ntBASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 SIGLEC16-201ENST00000599858 1437 ntBASIC12.32□□□□□ -0.44
ALMS1Q8TCU4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 AC006504.4-201ENST00000592118 1568 ntBASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 MKNK2P1-201ENST00000437526 628 ntBASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 AC018845.2-201ENST00000568326 409 ntBASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 IGLL3P-201ENST00000412472 434 ntBASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 BX005266.1-201ENST00000473402 457 ntBASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 AC011467.4-201ENST00000594891 528 ntBASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ALMS1Q8TCU4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 AL157384.1-201ENST00000445995 2473 ntBASIC12.3□□□□□ -0.44
ALMS1Q8TCU4 AC109322.1-201ENST00000524499 1264 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms