Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 HOMER2P1-201ENST00000455653 964 ntBASIC19.46■□□□□ 0.71
UBA3Q8TBC4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBA3Q8TBC4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 NEFHP1-201ENST00000412845 2629 ntBASIC19.45■□□□□ 0.7
UBA3Q8TBC4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA3Q8TBC4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 FAM8A6P-201ENST00000407496 1135 ntBASIC19.44■□□□□ 0.7
UBA3Q8TBC4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 AC112907.2-201ENST00000448639 330 ntBASIC19.44■□□□□ 0.7
UBA3Q8TBC4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA3Q8TBC4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 ESPNP-201ENST00000270691 2015 ntBASIC19.43■□□□□ 0.7
UBA3Q8TBC4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 AC009065.1-201ENST00000564055 1225 ntBASIC19.43■□□□□ 0.7
UBA3Q8TBC4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 NTF6B-201ENST00000591913 560 ntBASIC19.43■□□□□ 0.7
UBA3Q8TBC4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.43■□□□□ 0.7
UBA3Q8TBC4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms