Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 FAM197Y4-202ENST00000622692 608 ntBASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PIK3C3Q8NEB9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 AC138028.4-201ENST00000564984 1845 ntBASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 KRT8P11-201ENST00000409686 1436 ntBASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.24■□□□□ 0.35
PIK3C3Q8NEB9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 KRT8P3-201ENST00000519669 1449 ntBASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 AC112777.1-201ENST00000540175 1423 ntBASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 AC106820.2-201ENST00000563775 3264 ntBASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 TNRC18P3-201ENST00000441896 2691 ntBASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PIK3C3Q8NEB9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 AC093677.2-201ENST00000600169 1863 ntBASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIK3C3Q8NEB9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms