Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PNMA1Q8ND90 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PNMA1Q8ND90 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PNMA1Q8ND90 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PNMA1Q8ND90 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PNMA1Q8ND90 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.34■■□□□ 1.01
PNMA1Q8ND90 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PNMA1Q8ND90 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PNMA1Q8ND90 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 GPR32P1-201ENST00000601788 811 ntBASIC21.33■■□□□ 1.01
PNMA1Q8ND90 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PNMA1Q8ND90 AC093458.2-201ENST00000623150 629 ntBASIC21.33■■□□□ 1.01
PNMA1Q8ND90 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.33■■□□□ 1
PNMA1Q8ND90 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PNMA1Q8ND90 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.33■■□□□ 1
PNMA1Q8ND90 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
PNMA1Q8ND90 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.33■■□□□ 1
PNMA1Q8ND90 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.33■■□□□ 1
PNMA1Q8ND90 AC016734.2-201ENST00000624325 1377 ntBASIC21.33■■□□□ 1
PNMA1Q8ND90 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PNMA1Q8ND90 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.32■■□□□ 1
PNMA1Q8ND90 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.32■■□□□ 1
PNMA1Q8ND90 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.32■■□□□ 1
PNMA1Q8ND90 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.32■■□□□ 1
PNMA1Q8ND90 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.32■■□□□ 1
PNMA1Q8ND90 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.32■■□□□ 1
PNMA1Q8ND90 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.32■■□□□ 1
PNMA1Q8ND90 BX276092.5-203ENST00000456199 560 ntBASIC21.32■■□□□ 1
PNMA1Q8ND90 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.32■■□□□ 1
PNMA1Q8ND90 KRT8P26-201ENST00000534154 1276 ntBASIC21.32■■□□□ 1
PNMA1Q8ND90 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.32■■□□□ 1
PNMA1Q8ND90 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.32■■□□□ 1
PNMA1Q8ND90 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.32■■□□□ 1
PNMA1Q8ND90 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.32■■□□□ 1
PNMA1Q8ND90 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.32■■□□□ 1
PNMA1Q8ND90 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PNMA1Q8ND90 AL121672.3-201ENST00000608644 468 ntBASIC21.32■■□□□ 1
PNMA1Q8ND90 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNMA1Q8ND90 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.32■■□□□ 1
PNMA1Q8ND90 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.32■■□□□ 1
PNMA1Q8ND90 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.31■■□□□ 1
PNMA1Q8ND90 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.31■■□□□ 1
PNMA1Q8ND90 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
PNMA1Q8ND90 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.31■■□□□ 1
PNMA1Q8ND90 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.31■■□□□ 1
PNMA1Q8ND90 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 ESPNP-201ENST00000270691 2015 ntBASIC21.31■■□□□ 1
PNMA1Q8ND90 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 GMCL1P1-201ENST00000463439 1581 ntBASIC21.31■■□□□ 1
PNMA1Q8ND90 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNMA1Q8ND90 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.31■■□□□ 1
PNMA1Q8ND90 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.3■■□□□ 1
PNMA1Q8ND90 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.3■■□□□ 1
PNMA1Q8ND90 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.3■■□□□ 1
PNMA1Q8ND90 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PNMA1Q8ND90 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.3■■□□□ 1
PNMA1Q8ND90 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PNMA1Q8ND90 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.3■■□□□ 1
PNMA1Q8ND90 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms