Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 LINC01126-201ENST00000623515 1646 ntBASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 PCED1CP-201ENST00000419887 785 ntBASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 AP003733.1-201ENST00000491725 852 ntBASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAM1L1Q8N609 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 ESPNP-201ENST00000270691 2015 ntBASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 AC116407.4-201ENST00000623319 1061 ntBASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAM1L1Q8N609 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 AP000550.4-202ENST00000639755 178 ntBASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 IER3-202ENST00000376377 1350 ntBASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAM1L1Q8N609 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms