Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 Z83836.1-201ENST00000624605 1642 ntBASIC17.32■□□□□ 0.36
ARHGEF39Q8N4T4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.32■□□□□ 0.36
ARHGEF39Q8N4T4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARHGEF39Q8N4T4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ARHGEF39Q8N4T4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.32■□□□□ 0.36
ARHGEF39Q8N4T4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 KRT8P26-201ENST00000534154 1276 ntBASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 GPR32P1-201ENST00000601788 811 ntBASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 NPAP1P7-201ENST00000613027 823 ntBASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARHGEF39Q8N4T4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 AP002383.4-201ENST00000442518 975 ntBASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.3■□□□□ 0.36
ARHGEF39Q8N4T4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 TSPY22P-201ENST00000427496 604 ntBASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ARHGEF39Q8N4T4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms