Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 AC073621.1-201ENST00000392730 636 ntBASIC23.35■■□□□ 1.33
PROM2Q8N271 HLA-J-202ENST00000469281 1241 ntBASIC23.35■■□□□ 1.33
PROM2Q8N271 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC23.35■■□□□ 1.33
PROM2Q8N271 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.35■■□□□ 1.33
PROM2Q8N271 AP000867.4-201ENST00000641616 219 ntBASIC23.35■■□□□ 1.33
PROM2Q8N271 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PROM2Q8N271 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PROM2Q8N271 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.35■■□□□ 1.33
PROM2Q8N271 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PROM2Q8N271 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.35■■□□□ 1.33
PROM2Q8N271 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PROM2Q8N271 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.35■■□□□ 1.33
PROM2Q8N271 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PROM2Q8N271 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PROM2Q8N271 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.35■■□□□ 1.33
PROM2Q8N271 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.35■■□□□ 1.33
PROM2Q8N271 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.34■■□□□ 1.33
PROM2Q8N271 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.34■■□□□ 1.33
PROM2Q8N271 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
PROM2Q8N271 IRX1P1-201ENST00000438849 1838 ntBASIC23.34■■□□□ 1.33
PROM2Q8N271 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.34■■□□□ 1.33
PROM2Q8N271 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PROM2Q8N271 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PROM2Q8N271 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PROM2Q8N271 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.34■■□□□ 1.33
PROM2Q8N271 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.34■■□□□ 1.33
PROM2Q8N271 HLA-J-203ENST00000494367 1087 ntBASIC23.34■■□□□ 1.33
PROM2Q8N271 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC23.34■■□□□ 1.33
PROM2Q8N271 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC23.34■■□□□ 1.33
PROM2Q8N271 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PROM2Q8N271 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PROM2Q8N271 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PROM2Q8N271 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PROM2Q8N271 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PROM2Q8N271 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PROM2Q8N271 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PROM2Q8N271 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.33■■□□□ 1.33
PROM2Q8N271 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PROM2Q8N271 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.33■■□□□ 1.33
PROM2Q8N271 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PROM2Q8N271 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PROM2Q8N271 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PROM2Q8N271 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PROM2Q8N271 PNMT-202ENST00000394246 821 ntTSL 2 BASIC23.33■■□□□ 1.33
PROM2Q8N271 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
PROM2Q8N271 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.33■■□□□ 1.33
PROM2Q8N271 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
PROM2Q8N271 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PROM2Q8N271 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PROM2Q8N271 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PROM2Q8N271 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PROM2Q8N271 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PROM2Q8N271 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.33■■□□□ 1.32
PROM2Q8N271 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.32■■□□□ 1.32
PROM2Q8N271 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.32■■□□□ 1.32
PROM2Q8N271 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PROM2Q8N271 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.32■■□□□ 1.32
PROM2Q8N271 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
PROM2Q8N271 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC23.32■■□□□ 1.32
PROM2Q8N271 MIR1199-201ENST00000621445 119 ntBASIC23.32■■□□□ 1.32
PROM2Q8N271 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 GABARAPL3-202ENST00000624044 1851 ntBASIC23.32■■□□□ 1.32
PROM2Q8N271 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PROM2Q8N271 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PROM2Q8N271 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PROM2Q8N271 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.31■■□□□ 1.32
PROM2Q8N271 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC23.31■■□□□ 1.32
PROM2Q8N271 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC23.31■■□□□ 1.32
PROM2Q8N271 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC23.31■■□□□ 1.32
PROM2Q8N271 AC011467.4-201ENST00000594891 528 ntBASIC23.31■■□□□ 1.32
PROM2Q8N271 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.31■■□□□ 1.32
PROM2Q8N271 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
PROM2Q8N271 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.31■■□□□ 1.32
PROM2Q8N271 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
PROM2Q8N271 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.31■■□□□ 1.32
PROM2Q8N271 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 AC092667.1-201ENST00000434301 2586 ntBASIC23.31■■□□□ 1.32
PROM2Q8N271 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PROM2Q8N271 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PROM2Q8N271 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
PROM2Q8N271 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms