Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 AC139713.2-201ENST00000641328 2723 ntBASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRIM42Q8IWZ5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 FAM201B-201ENST00000458407 597 ntBASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 PRSS44-201ENST00000515154 1146 ntBASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 SOX15-203ENST00000570788 1093 ntBASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM42Q8IWZ5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM42Q8IWZ5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TRIM42Q8IWZ5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM42Q8IWZ5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM42Q8IWZ5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM42Q8IWZ5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.33■□□□□ 0.53
TRIM42Q8IWZ5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 NBPF21P-201ENST00000425093 1451 ntBASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRIM42Q8IWZ5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms