Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 AC106730.1-201ENST00000566722 1090 ntBASIC19.46■□□□□ 0.71
RNF135Q8IUD6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 TERC-201ENST00000602385 541 ntBASIC19.46■□□□□ 0.71
RNF135Q8IUD6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 AC018445.3-201ENST00000624177 1945 ntBASIC19.46■□□□□ 0.71
RNF135Q8IUD6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 AP000974.1-201ENST00000623909 2387 ntBASIC19.46■□□□□ 0.71
RNF135Q8IUD6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 FAM197Y8-203ENST00000450145 560 ntBASIC19.45■□□□□ 0.7
RNF135Q8IUD6 RNPS1P1-201ENST00000507437 918 ntBASIC19.45■□□□□ 0.7
RNF135Q8IUD6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 TEX21P-204ENST00000641479 1693 ntBASIC19.45■□□□□ 0.7
RNF135Q8IUD6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF135Q8IUD6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 HCG11-201ENST00000411553 5696 ntBASIC19.44■□□□□ 0.7
RNF135Q8IUD6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 AL031284.1-201ENST00000419297 478 ntBASIC19.44■□□□□ 0.7
RNF135Q8IUD6 IGHV3-47-201ENST00000425060 335 ntBASIC19.44■□□□□ 0.7
RNF135Q8IUD6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF135Q8IUD6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF135Q8IUD6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms