Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 KSR1P1-201ENST00000446298 240 ntBASIC16.38■□□□□ 0.21
LRRC28Q86X40 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 C1QL1P1-201ENST00000568105 661 ntBASIC16.38■□□□□ 0.21
LRRC28Q86X40 CD177P1-201ENST00000606252 935 ntBASIC16.38■□□□□ 0.21
LRRC28Q86X40 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC28Q86X40 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC28Q86X40 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 MIR4785-201ENST00000585005 73 ntBASIC16.37■□□□□ 0.21
LRRC28Q86X40 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 AC135776.1-201ENST00000319817 2481 ntBASIC16.37■□□□□ 0.21
LRRC28Q86X40 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC28Q86X40 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC28Q86X40 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 NIFKP9-201ENST00000419265 221 ntBASIC16.36■□□□□ 0.21
LRRC28Q86X40 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 FAM197Y1-201ENST00000421178 764 ntBASIC16.36■□□□□ 0.21
LRRC28Q86X40 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 KRT8P8-201ENST00000434750 1448 ntBASIC16.36■□□□□ 0.21
LRRC28Q86X40 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC28Q86X40 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LRRC28Q86X40 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC28Q86X40 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC28Q86X40 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms