Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.23■□□□□ 0.19
RTTNQ86VV8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTTNQ86VV8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 CLEC4GP1-201ENST00000596555 870 ntBASIC16.22■□□□□ 0.19
RTTNQ86VV8 AC116407.4-201ENST00000623319 1061 ntBASIC16.22■□□□□ 0.19
RTTNQ86VV8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTTNQ86VV8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.22■□□□□ 0.19
RTTNQ86VV8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 AL109659.2-201ENST00000606809 1674 ntBASIC16.21■□□□□ 0.19
RTTNQ86VV8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 MYC-208ENST00000641036 567 ntBASIC16.21■□□□□ 0.19
RTTNQ86VV8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTTNQ86VV8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.21■□□□□ 0.19
RTTNQ86VV8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RTTNQ86VV8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RTTNQ86VV8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RTTNQ86VV8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RTTNQ86VV8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
RTTNQ86VV8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.21■□□□□ 0.18
RTTNQ86VV8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RTTNQ86VV8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTTNQ86VV8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTTNQ86VV8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms