Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 FSCN1P1-201ENST00000568912 1481 ntBASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AC068587.6-202ENST00000641839 5619 ntBASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC11.86□□□□□ -0.51
MRPL55Q7Z7F7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 KRT18P29-201ENST00000397031 1267 ntBASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 MIR6786-201ENST00000616843 113 ntBASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 RCC2P3-201ENST00000418112 1537 ntBASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
MRPL55Q7Z7F7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 AL162741.1-201ENST00000565563 1558 ntBASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 OR6D1P-203ENST00000641209 4860 ntBASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
MRPL55Q7Z7F7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms