Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RN7SL471P-201ENST00000580476 299 ntBASIC16.64■□□□□ 0.25
SHFQ7M4L6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 MYC-208ENST00000641036 567 ntBASIC16.64■□□□□ 0.25
SHFQ7M4L6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 AP002982.1-201ENST00000492365 877 ntBASIC16.63■□□□□ 0.25
SHFQ7M4L6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 AL353708.3-201ENST00000610272 989 ntBASIC16.63■□□□□ 0.25
SHFQ7M4L6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 AC008556.1-201ENST00000610908 2040 ntBASIC16.63■□□□□ 0.25
SHFQ7M4L6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SHFQ7M4L6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHFQ7M4L6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 KRT8P45-201ENST00000414328 1447 ntBASIC16.62■□□□□ 0.25
SHFQ7M4L6 KRT8P3-201ENST00000519669 1449 ntBASIC16.62■□□□□ 0.25
SHFQ7M4L6 AC099398.1-201ENST00000567919 2776 ntBASIC16.62■□□□□ 0.25
SHFQ7M4L6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 AC004980.1-204ENST00000429707 299 ntBASIC16.62■□□□□ 0.25
SHFQ7M4L6 KSR1P1-201ENST00000446298 240 ntBASIC16.62■□□□□ 0.25
SHFQ7M4L6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SHFQ7M4L6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SHFQ7M4L6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 AC099343.3-201ENST00000605834 2503 ntBASIC16.61■□□□□ 0.25
SHFQ7M4L6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHFQ7M4L6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 AL353807.1-201ENST00000427475 662 ntBASIC16.61■□□□□ 0.25
SHFQ7M4L6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SHFQ7M4L6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms