Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HIST2H3AQ71DI3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HIST2H3AQ71DI3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HIST2H3AQ71DI3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 MIR149-201ENST00000384879 89 ntBASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 AC104390.1-201ENST00000555663 520 ntBASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 MIR3180-4-201ENST00000582223 153 ntBASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 FAM87A-204ENST00000613235 858 ntBASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST2H3AQ71DI3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 AC135776.1-201ENST00000319817 2481 ntBASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST2H3AQ71DI3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms