Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RAPH1Q70E73 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.5■□□□□ 0.55
RAPH1Q70E73 MIR6786-201ENST00000616843 113 ntBASIC18.5■□□□□ 0.55
RAPH1Q70E73 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.5■□□□□ 0.55
RAPH1Q70E73 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RAPH1Q70E73 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAPH1Q70E73 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAPH1Q70E73 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAPH1Q70E73 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.5■□□□□ 0.55
RAPH1Q70E73 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.5■□□□□ 0.55
RAPH1Q70E73 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAPH1Q70E73 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAPH1Q70E73 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.5■□□□□ 0.55
RAPH1Q70E73 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAPH1Q70E73 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.5■□□□□ 0.55
RAPH1Q70E73 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAPH1Q70E73 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 AC011506.1-201ENST00000474329 610 ntBASIC18.49■□□□□ 0.55
RAPH1Q70E73 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
RAPH1Q70E73 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAPH1Q70E73 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 B3GAT3P1-201ENST00000471720 806 ntBASIC18.48■□□□□ 0.55
RAPH1Q70E73 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAPH1Q70E73 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.48■□□□□ 0.55
RAPH1Q70E73 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RAPH1Q70E73 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAPH1Q70E73 MYLKP1-201ENST00000509077 1580 ntBASIC18.47■□□□□ 0.55
RAPH1Q70E73 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.46■□□□□ 0.55
RAPH1Q70E73 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAPH1Q70E73 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.46■□□□□ 0.55
RAPH1Q70E73 FSCN1P1-201ENST00000568912 1481 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms