Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CASC4Q6P4E1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 GPAT2P1-201ENST00000444924 1672 ntBASIC18.77■□□□□ 0.6
CASC4Q6P4E1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 ABHD17AP1-201ENST00000358206 933 ntBASIC18.77■□□□□ 0.6
CASC4Q6P4E1 AL023284.2-201ENST00000405850 579 ntBASIC18.77■□□□□ 0.6
CASC4Q6P4E1 AL355355.2-201ENST00000442321 338 ntBASIC18.77■□□□□ 0.6
CASC4Q6P4E1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 AC116562.2-201ENST00000507042 360 ntBASIC18.77■□□□□ 0.6
CASC4Q6P4E1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CASC4Q6P4E1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CASC4Q6P4E1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CASC4Q6P4E1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CASC4Q6P4E1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CASC4Q6P4E1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CASC4Q6P4E1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CASC4Q6P4E1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CASC4Q6P4E1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CASC4Q6P4E1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 CRYGFP-201ENST00000418459 633 ntBASIC18.76■□□□□ 0.59
CASC4Q6P4E1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 AC113410.3-201ENST00000623366 203 ntBASIC18.76■□□□□ 0.59
CASC4Q6P4E1 AL049637.2-201ENST00000641778 930 ntBASIC18.76■□□□□ 0.59
CASC4Q6P4E1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CASC4Q6P4E1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 FZD10-202ENST00000539839 3282 ntBASIC18.75■□□□□ 0.59
CASC4Q6P4E1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 AC012618.2-201ENST00000428058 849 ntBASIC18.75■□□□□ 0.59
CASC4Q6P4E1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms