Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 AC104417.2-201ENST00000562989 1793 ntBASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 MIR718-201ENST00000390190 70 ntBASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 CR392000.1-201ENST00000624770 1228 ntBASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TMEM53Q6P2H8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 RPS2P55-201ENST00000397318 883 ntBASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 AC012618.2-201ENST00000428058 849 ntBASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 RPS2P4-201ENST00000476944 856 ntBASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 AC107956.1-201ENST00000494359 873 ntBASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM53Q6P2H8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM53Q6P2H8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM53Q6P2H8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.83■□□□□ 0.29
TMEM53Q6P2H8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM53Q6P2H8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM53Q6P2H8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM53Q6P2H8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM53Q6P2H8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 AL118508.1-201ENST00000613502 2345 ntBASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 AL031985.4-201ENST00000642138 673 ntBASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM53Q6P2H8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMEM53Q6P2H8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms