Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.58■□□□□ 0.56
CDH17Q12864 AC104390.1-201ENST00000555663 520 ntBASIC18.58■□□□□ 0.56
CDH17Q12864 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH17Q12864 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDH17Q12864 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH17Q12864 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH17Q12864 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.58■□□□□ 0.56
CDH17Q12864 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 AC099343.3-201ENST00000605834 2503 ntBASIC18.57■□□□□ 0.56
CDH17Q12864 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH17Q12864 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CDH17Q12864 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 AL596275.1-201ENST00000423464 877 ntBASIC18.57■□□□□ 0.56
CDH17Q12864 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH17Q12864 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH17Q12864 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH17Q12864 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CDH17Q12864 AL512604.3-201ENST00000569583 964 ntBASIC18.57■□□□□ 0.56
CDH17Q12864 MIR3180-4-201ENST00000582223 153 ntBASIC18.57■□□□□ 0.56
CDH17Q12864 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDH17Q12864 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDH17Q12864 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH17Q12864 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CDH17Q12864 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CDH17Q12864 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH17Q12864 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH17Q12864 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.56■□□□□ 0.56
CDH17Q12864 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH17Q12864 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH17Q12864 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 NOC2LP2-201ENST00000407594 1944 ntBASIC18.56■□□□□ 0.56
CDH17Q12864 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH17Q12864 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH17Q12864 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDH17Q12864 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH17Q12864 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH17Q12864 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH17Q12864 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH17Q12864 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH17Q12864 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms