Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 AC008764.6-201ENST00000595909 2069 ntBASIC17.73■□□□□ 0.43
HMGCS1Q01581 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 AP000525.1-201ENST00000608286 694 ntBASIC17.73■□□□□ 0.43
HMGCS1Q01581 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HMGCS1Q01581 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS1Q01581 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 UNC93B2-201ENST00000285383 730 ntBASIC17.72■□□□□ 0.43
HMGCS1Q01581 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 AL390955.1-201ENST00000428694 934 ntBASIC17.72■□□□□ 0.43
HMGCS1Q01581 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 SNORA78-201ENST00000459373 127 ntBASIC17.72■□□□□ 0.43
HMGCS1Q01581 MIR4497-201ENST00000583208 89 ntBASIC17.72■□□□□ 0.43
HMGCS1Q01581 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS1Q01581 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HMGCS1Q01581 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.71■□□□□ 0.43
HMGCS1Q01581 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 AL596275.1-201ENST00000423464 877 ntBASIC17.71■□□□□ 0.43
HMGCS1Q01581 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 AP003041.3-201ENST00000527151 707 ntBASIC17.71■□□□□ 0.43
HMGCS1Q01581 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 AL023803.3-201ENST00000615559 522 ntBASIC17.71■□□□□ 0.43
HMGCS1Q01581 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS1Q01581 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS1Q01581 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
HMGCS1Q01581 FZD10-202ENST00000539839 3282 ntBASIC17.71■□□□□ 0.42
HMGCS1Q01581 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMGCS1Q01581 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMGCS1Q01581 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms