Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.83□□□□□ -0.04
CX3CL1P78423 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.83□□□□□ -0.04
CX3CL1P78423 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CX3CL1P78423 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.82□□□□□ -0.04
CX3CL1P78423 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CX3CL1P78423 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.82□□□□□ -0.04
CX3CL1P78423 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.82□□□□□ -0.04
CX3CL1P78423 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 INGX-201ENST00000359239 846 ntBASIC14.82□□□□□ -0.04
CX3CL1P78423 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.82□□□□□ -0.04
CX3CL1P78423 AC087499.1-201ENST00000418141 1075 ntBASIC14.82□□□□□ -0.04
CX3CL1P78423 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.82□□□□□ -0.04
CX3CL1P78423 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CX3CL1P78423 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CX3CL1P78423 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.82□□□□□ -0.04
CX3CL1P78423 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CX3CL1P78423 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.82□□□□□ -0.04
CX3CL1P78423 LINC01568-207ENST00000641790 1380 ntBASIC14.82□□□□□ -0.04
CX3CL1P78423 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CX3CL1P78423 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CX3CL1P78423 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.81□□□□□ -0.04
CX3CL1P78423 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CX3CL1P78423 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CX3CL1P78423 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.81□□□□□ -0.04
CX3CL1P78423 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CX3CL1P78423 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 MIR564-202ENST00000385049 94 ntBASIC14.81□□□□□ -0.04
CX3CL1P78423 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CX3CL1P78423 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CX3CL1P78423 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 MIR3180-5-201ENST00000583743 153 ntBASIC14.81□□□□□ -0.04
CX3CL1P78423 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CX3CL1P78423 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.81□□□□□ -0.04
CX3CL1P78423 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.81□□□□□ -0.04
CX3CL1P78423 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.81□□□□□ -0.04
CX3CL1P78423 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.81□□□□□ -0.04
CX3CL1P78423 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CX3CL1P78423 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.81□□□□□ -0.04
CX3CL1P78423 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CX3CL1P78423 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CL1P78423 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CX3CL1P78423 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CL1P78423 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CL1P78423 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CL1P78423 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.8□□□□□ -0.04
CX3CL1P78423 ECEL1P2-202ENST00000465689 757 ntBASIC14.8□□□□□ -0.04
CX3CL1P78423 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.8□□□□□ -0.04
CX3CL1P78423 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.8□□□□□ -0.04
CX3CL1P78423 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CL1P78423 AC073912.3-201ENST00000624414 853 ntBASIC14.8□□□□□ -0.04
CX3CL1P78423 KRT18P22-201ENST00000402024 1347 ntBASIC14.8□□□□□ -0.04
CX3CL1P78423 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CL1P78423 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CX3CL1P78423 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
CX3CL1P78423 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.8□□□□□ -0.04
CX3CL1P78423 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms