Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.12■□□□□ 0.65
IRX4P78413 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.12■□□□□ 0.65
IRX4P78413 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
IRX4P78413 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
IRX4P78413 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
IRX4P78413 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
IRX4P78413 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.12■□□□□ 0.65
IRX4P78413 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.12■□□□□ 0.65
IRX4P78413 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.12■□□□□ 0.65
IRX4P78413 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 AC008622.2-201ENST00000617006 1229 ntBASIC19.12■□□□□ 0.65
IRX4P78413 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.12■□□□□ 0.65
IRX4P78413 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
IRX4P78413 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
IRX4P78413 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
IRX4P78413 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.11■□□□□ 0.65
IRX4P78413 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.11■□□□□ 0.65
IRX4P78413 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
IRX4P78413 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.11■□□□□ 0.65
IRX4P78413 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.11■□□□□ 0.65
IRX4P78413 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.11■□□□□ 0.65
IRX4P78413 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 VENTXP5-201ENST00000523979 775 ntBASIC19.11■□□□□ 0.65
IRX4P78413 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.11■□□□□ 0.65
IRX4P78413 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
IRX4P78413 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
IRX4P78413 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
IRX4P78413 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX4P78413 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
IRX4P78413 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.1■□□□□ 0.65
IRX4P78413 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.1■□□□□ 0.65
IRX4P78413 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
IRX4P78413 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
IRX4P78413 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
IRX4P78413 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
IRX4P78413 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
IRX4P78413 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 AL136038.3-201ENST00000561909 1096 ntBASIC19.1■□□□□ 0.65
IRX4P78413 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.1■□□□□ 0.65
IRX4P78413 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 AL691432.3-201ENST00000621860 400 ntBASIC19.1■□□□□ 0.65
IRX4P78413 AC012313.10-201ENST00000623509 926 ntBASIC19.1■□□□□ 0.65
IRX4P78413 AC104417.2-201ENST00000562989 1793 ntBASIC19.1■□□□□ 0.65
IRX4P78413 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
IRX4P78413 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.1■□□□□ 0.65
IRX4P78413 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
IRX4P78413 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
IRX4P78413 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX4P78413 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.1■□□□□ 0.65
IRX4P78413 OR6D1P-202ENST00000641007 5290 ntBASIC19.09■□□□□ 0.65
IRX4P78413 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.09■□□□□ 0.65
IRX4P78413 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
IRX4P78413 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.09■□□□□ 0.65
IRX4P78413 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX4P78413 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.09■□□□□ 0.65
IRX4P78413 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms