Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.55■□□□□ 0.56
PRAMEP78395 MMP23A-201ENST00000234610 1017 ntBASIC18.55■□□□□ 0.56
PRAMEP78395 TSPY14P-201ENST00000303979 915 ntBASIC18.55■□□□□ 0.56
PRAMEP78395 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.55■□□□□ 0.56
PRAMEP78395 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 EGLN1P1-201ENST00000531623 762 ntBASIC18.55■□□□□ 0.56
PRAMEP78395 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 AC066615.1-201ENST00000640911 628 ntBASIC18.55■□□□□ 0.56
PRAMEP78395 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.55■□□□□ 0.56
PRAMEP78395 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PRAMEP78395 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
PRAMEP78395 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PRAMEP78395 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.55■□□□□ 0.56
PRAMEP78395 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.54■□□□□ 0.56
PRAMEP78395 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEP78395 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.54■□□□□ 0.56
PRAMEP78395 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEP78395 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEP78395 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEP78395 AL596275.1-201ENST00000423464 877 ntBASIC18.54■□□□□ 0.56
PRAMEP78395 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEP78395 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.54■□□□□ 0.56
PRAMEP78395 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.54■□□□□ 0.56
PRAMEP78395 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.54■□□□□ 0.56
PRAMEP78395 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
PRAMEP78395 AC010653.2-201ENST00000623505 997 ntBASIC18.54■□□□□ 0.56
PRAMEP78395 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEP78395 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PRAMEP78395 AL390961.4-201ENST00000623958 2535 ntBASIC18.54■□□□□ 0.56
PRAMEP78395 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PRAMEP78395 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.54■□□□□ 0.56
PRAMEP78395 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PRAMEP78395 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PRAMEP78395 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEP78395 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEP78395 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEP78395 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEP78395 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEP78395 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEP78395 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.53■□□□□ 0.56
PRAMEP78395 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.53■□□□□ 0.56
PRAMEP78395 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.53■□□□□ 0.56
PRAMEP78395 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.53■□□□□ 0.56
PRAMEP78395 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.53■□□□□ 0.56
PRAMEP78395 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 KRT8P9-201ENST00000558927 1449 ntBASIC18.53■□□□□ 0.56
PRAMEP78395 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 CR769767.2-201ENST00000622735 460 ntBASIC18.53■□□□□ 0.56
PRAMEP78395 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PRAMEP78395 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PRAMEP78395 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PRAMEP78395 CYP2D8P-201ENST00000433633 1490 ntBASIC18.52■□□□□ 0.56
PRAMEP78395 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEP78395 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEP78395 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 KRT8P50-201ENST00000562022 1438 ntBASIC18.52■□□□□ 0.56
PRAMEP78395 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.52■□□□□ 0.56
PRAMEP78395 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.52■□□□□ 0.56
PRAMEP78395 WWOX-216ENST00000569818 525 ntBASIC18.52■□□□□ 0.56
PRAMEP78395 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.52■□□□□ 0.56
PRAMEP78395 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 PKD1P1-201ENST00000458669 6805 ntBASIC18.52■□□□□ 0.56
PRAMEP78395 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PRAMEP78395 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PRAMEP78395 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.52■□□□□ 0.55
PRAMEP78395 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.52■□□□□ 0.55
PRAMEP78395 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
PRAMEP78395 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PRAMEP78395 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PRAMEP78395 AL162741.1-201ENST00000565563 1558 ntBASIC18.51■□□□□ 0.55
PRAMEP78395 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEP78395 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms