Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ASIC1P78348 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ASIC1P78348 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.53■□□□□ 0.88
ASIC1P78348 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ASIC1P78348 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ASIC1P78348 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ASIC1P78348 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ASIC1P78348 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ASIC1P78348 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
ASIC1P78348 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ASIC1P78348 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ASIC1P78348 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.52■□□□□ 0.88
ASIC1P78348 AC093677.2-201ENST00000600169 1863 ntBASIC20.52■□□□□ 0.88
ASIC1P78348 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ASIC1P78348 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.52■□□□□ 0.88
ASIC1P78348 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ASIC1P78348 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ASIC1P78348 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.52■□□□□ 0.88
ASIC1P78348 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ASIC1P78348 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ASIC1P78348 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.52■□□□□ 0.88
ASIC1P78348 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
ASIC1P78348 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ASIC1P78348 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ASIC1P78348 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.52■□□□□ 0.88
ASIC1P78348 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ASIC1P78348 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ASIC1P78348 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.51■□□□□ 0.87
ASIC1P78348 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.51■□□□□ 0.87
ASIC1P78348 HMGA1P5-201ENST00000412453 271 ntBASIC20.51■□□□□ 0.87
ASIC1P78348 AC087499.1-201ENST00000418141 1075 ntBASIC20.51■□□□□ 0.87
ASIC1P78348 AC009947.2-201ENST00000444014 672 ntBASIC20.51■□□□□ 0.87
ASIC1P78348 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.51■□□□□ 0.87
ASIC1P78348 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.51■□□□□ 0.87
ASIC1P78348 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.51■□□□□ 0.87
ASIC1P78348 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.51■□□□□ 0.87
ASIC1P78348 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.51■□□□□ 0.87
ASIC1P78348 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ASIC1P78348 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.51■□□□□ 0.87
ASIC1P78348 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ASIC1P78348 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.5■□□□□ 0.87
ASIC1P78348 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.5■□□□□ 0.87
ASIC1P78348 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 AC009102.3-201ENST00000623118 1491 ntBASIC20.5■□□□□ 0.87
ASIC1P78348 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ASIC1P78348 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
ASIC1P78348 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 SDHAP2-201ENST00000455183 2001 ntBASIC20.5■□□□□ 0.87
ASIC1P78348 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ASIC1P78348 MIR149-201ENST00000384879 89 ntBASIC20.5■□□□□ 0.87
ASIC1P78348 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.5■□□□□ 0.87
ASIC1P78348 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.5■□□□□ 0.87
ASIC1P78348 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.5■□□□□ 0.87
ASIC1P78348 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.5■□□□□ 0.87
ASIC1P78348 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.5■□□□□ 0.87
ASIC1P78348 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.5■□□□□ 0.87
ASIC1P78348 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ASIC1P78348 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ASIC1P78348 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ASIC1P78348 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ASIC1P78348 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ASIC1P78348 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ASIC1P78348 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.49■□□□□ 0.87
ASIC1P78348 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.49■□□□□ 0.87
ASIC1P78348 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms