Protein–RNA interactions for Protein: P61587

RND3, Rho-related GTP-binding protein RhoE, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RND3P61587 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RND3P61587 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RND3P61587 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RND3P61587 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.17■□□□□ 0.02
RND3P61587 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RND3P61587 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.17■□□□□ 0.02
RND3P61587 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
RND3P61587 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.16■□□□□ 0.02
RND3P61587 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.16■□□□□ 0.02
RND3P61587 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.16■□□□□ 0.02
RND3P61587 AC004951.3-201ENST00000418645 1148 ntBASIC15.16■□□□□ 0.02
RND3P61587 NIFKP9-201ENST00000419265 221 ntBASIC15.16■□□□□ 0.02
RND3P61587 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.16■□□□□ 0.02
RND3P61587 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.16■□□□□ 0.02
RND3P61587 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.16■□□□□ 0.02
RND3P61587 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.16■□□□□ 0.02
RND3P61587 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RND3P61587 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RND3P61587 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RND3P61587 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RND3P61587 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 AC006116.8-202ENST00000587620 1550 ntBASIC15.15■□□□□ 0.02
RND3P61587 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RND3P61587 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RND3P61587 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.15■□□□□ 0.02
RND3P61587 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.15■□□□□ 0.02
RND3P61587 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.15■□□□□ 0.02
RND3P61587 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.15■□□□□ 0.02
RND3P61587 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 KRT17P3-201ENST00000420566 1262 ntBASIC15.15■□□□□ 0.02
RND3P61587 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.15■□□□□ 0.02
RND3P61587 CKBP1-201ENST00000565489 1086 ntBASIC15.15■□□□□ 0.02
RND3P61587 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.15■□□□□ 0.02
RND3P61587 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.15■□□□□ 0.02
RND3P61587 AC069544.1-201ENST00000609399 999 ntBASIC15.15■□□□□ 0.02
RND3P61587 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.15■□□□□ 0.02
RND3P61587 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.15■□□□□ 0.02
RND3P61587 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.15■□□□□ 0.02
RND3P61587 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RND3P61587 AL645608.8-201ENST00000606034 2086 ntBASIC15.15■□□□□ 0.02
RND3P61587 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.15■□□□□ 0.02
RND3P61587 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RND3P61587 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.15■□□□□ 0.02
RND3P61587 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RND3P61587 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.15■□□□□ 0.02
RND3P61587 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 PHGDH-209ENST00000641074 1780 ntBASIC15.14■□□□□ 0.01
RND3P61587 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RND3P61587 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.14■□□□□ 0.01
RND3P61587 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 MIR564-202ENST00000385049 94 ntBASIC15.14■□□□□ 0.01
RND3P61587 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.14■□□□□ 0.01
RND3P61587 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.14■□□□□ 0.01
RND3P61587 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RND3P61587 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.14■□□□□ 0.01
RND3P61587 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RND3P61587 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RND3P61587 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.14■□□□□ 0.01
RND3P61587 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms