Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNQ4P56696 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.35■■□□□ 1.33
KCNQ4P56696 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.35■■□□□ 1.33
KCNQ4P56696 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.35■■□□□ 1.33
KCNQ4P56696 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 MTDHP4-201ENST00000600287 670 ntBASIC23.35■■□□□ 1.33
KCNQ4P56696 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNQ4P56696 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
KCNQ4P56696 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNQ4P56696 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.35■■□□□ 1.33
KCNQ4P56696 KRT18P28-201ENST00000453838 1332 ntBASIC23.34■■□□□ 1.33
KCNQ4P56696 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
KCNQ4P56696 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNQ4P56696 AC141586.3-201ENST00000562166 1838 ntBASIC23.34■■□□□ 1.33
KCNQ4P56696 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
KCNQ4P56696 AC004832.2-201ENST00000426397 482 ntBASIC23.34■■□□□ 1.33
KCNQ4P56696 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 AC113404.2-201ENST00000507884 177 ntBASIC23.34■■□□□ 1.33
KCNQ4P56696 RNA5SP416-201ENST00000516838 111 ntBASIC23.34■■□□□ 1.33
KCNQ4P56696 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNQ4P56696 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
KCNQ4P56696 AC105339.3-201ENST00000560043 636 ntBASIC23.34■■□□□ 1.33
KCNQ4P56696 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNQ4P56696 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNQ4P56696 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
KCNQ4P56696 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
KCNQ4P56696 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNQ4P56696 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNQ4P56696 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.33■■□□□ 1.33
KCNQ4P56696 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.33■■□□□ 1.33
KCNQ4P56696 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNQ4P56696 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNQ4P56696 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNQ4P56696 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.33■■□□□ 1.33
KCNQ4P56696 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KCNQ4P56696 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNQ4P56696 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNQ4P56696 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNQ4P56696 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNQ4P56696 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNQ4P56696 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNQ4P56696 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
KCNQ4P56696 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
KCNQ4P56696 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.33■■□□□ 1.32
KCNQ4P56696 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
KCNQ4P56696 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
KCNQ4P56696 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNQ4P56696 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KCNQ4P56696 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNQ4P56696 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNQ4P56696 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNQ4P56696 METTL21AP1-201ENST00000438852 635 ntBASIC23.32■■□□□ 1.32
KCNQ4P56696 AC009947.1-201ENST00000444350 727 ntBASIC23.32■■□□□ 1.32
KCNQ4P56696 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.32■■□□□ 1.32
KCNQ4P56696 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNQ4P56696 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.32■■□□□ 1.32
KCNQ4P56696 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNQ4P56696 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNQ4P56696 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
KCNQ4P56696 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNQ4P56696 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNQ4P56696 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNQ4P56696 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNQ4P56696 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNQ4P56696 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KCNQ4P56696 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
KCNQ4P56696 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
KCNQ4P56696 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.31■■□□□ 1.32
KCNQ4P56696 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNQ4P56696 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KCNQ4P56696 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KCNQ4P56696 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
KCNQ4P56696 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KCNQ4P56696 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
KCNQ4P56696 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.31■■□□□ 1.32
KCNQ4P56696 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
KCNQ4P56696 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.31■■□□□ 1.32
KCNQ4P56696 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.31■■□□□ 1.32
KCNQ4P56696 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms