Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.9■□□□□ 0.94
TM4SF4P48230 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
TM4SF4P48230 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TM4SF4P48230 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF4P48230 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.9■□□□□ 0.94
TM4SF4P48230 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF4P48230 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF4P48230 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 AC006557.2-201ENST00000592985 1240 ntBASIC20.9■□□□□ 0.94
TM4SF4P48230 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 AL022326.1-202ENST00000641533 845 ntBASIC20.9■□□□□ 0.94
TM4SF4P48230 AC092865.6-201ENST00000642101 219 ntBASIC20.9■□□□□ 0.94
TM4SF4P48230 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TM4SF4P48230 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF4P48230 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF4P48230 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM4SF4P48230 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.9■□□□□ 0.94
TM4SF4P48230 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TM4SF4P48230 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM4SF4P48230 AC079776.2-201ENST00000641154 1609 ntBASIC20.89■□□□□ 0.94
TM4SF4P48230 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.89■□□□□ 0.94
TM4SF4P48230 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
TM4SF4P48230 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.89■□□□□ 0.94
TM4SF4P48230 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM4SF4P48230 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM4SF4P48230 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.89■□□□□ 0.94
TM4SF4P48230 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.89■□□□□ 0.94
TM4SF4P48230 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF4P48230 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF4P48230 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TM4SF4P48230 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.89■□□□□ 0.93
TM4SF4P48230 MKNK2P1-201ENST00000437526 628 ntBASIC20.89■□□□□ 0.93
TM4SF4P48230 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.89■□□□□ 0.93
TM4SF4P48230 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.89■□□□□ 0.93
TM4SF4P48230 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.89■□□□□ 0.93
TM4SF4P48230 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF4P48230 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF4P48230 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF4P48230 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.89■□□□□ 0.93
TM4SF4P48230 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.89■□□□□ 0.93
TM4SF4P48230 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM4SF4P48230 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TM4SF4P48230 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TM4SF4P48230 MTMR9LP-203ENST00000426597 1545 ntBASIC20.88■□□□□ 0.93
TM4SF4P48230 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.88■□□□□ 0.93
TM4SF4P48230 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF4P48230 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF4P48230 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF4P48230 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF4P48230 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TM4SF4P48230 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF4P48230 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.88■□□□□ 0.93
TM4SF4P48230 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.88■□□□□ 0.93
TM4SF4P48230 PRYP5-201ENST00000451909 266 ntBASIC20.88■□□□□ 0.93
TM4SF4P48230 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.88■□□□□ 0.93
TM4SF4P48230 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF4P48230 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.88■□□□□ 0.93
TM4SF4P48230 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
TM4SF4P48230 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.88■□□□□ 0.93
TM4SF4P48230 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.88■□□□□ 0.93
TM4SF4P48230 AC106028.4-201ENST00000614509 607 ntBASIC20.88■□□□□ 0.93
TM4SF4P48230 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF4P48230 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.88■□□□□ 0.93
TM4SF4P48230 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.88■□□□□ 0.93
TM4SF4P48230 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.88■□□□□ 0.93
TM4SF4P48230 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM4SF4P48230 AL024508.2-201ENST00000607749 1894 ntBASIC20.88■□□□□ 0.93
TM4SF4P48230 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF4P48230 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.87■□□□□ 0.93
TM4SF4P48230 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF4P48230 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.87■□□□□ 0.93
TM4SF4P48230 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 BX005266.1-201ENST00000473402 457 ntBASIC20.87■□□□□ 0.93
TM4SF4P48230 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF4P48230 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF4P48230 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TM4SF4P48230 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.87■□□□□ 0.93
TM4SF4P48230 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF4P48230 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF4P48230 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.87■□□□□ 0.93
TM4SF4P48230 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TM4SF4P48230 AC092667.1-201ENST00000434301 2586 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms