Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.43■□□□□ 0.38
CHI3L1P36222 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CHI3L1P36222 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CHI3L1P36222 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.43■□□□□ 0.38
CHI3L1P36222 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHI3L1P36222 AL023284.2-201ENST00000405850 579 ntBASIC17.43■□□□□ 0.38
CHI3L1P36222 UBE2SP1-201ENST00000450587 669 ntBASIC17.43■□□□□ 0.38
CHI3L1P36222 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.43■□□□□ 0.38
CHI3L1P36222 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.43■□□□□ 0.38
CHI3L1P36222 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.43■□□□□ 0.38
CHI3L1P36222 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHI3L1P36222 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHI3L1P36222 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CHI3L1P36222 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHI3L1P36222 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CHI3L1P36222 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CHI3L1P36222 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.42■□□□□ 0.38
CHI3L1P36222 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHI3L1P36222 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 RPS2P55-201ENST00000397318 883 ntBASIC17.42■□□□□ 0.38
CHI3L1P36222 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 AC107956.1-201ENST00000494359 873 ntBASIC17.42■□□□□ 0.38
CHI3L1P36222 AC116562.2-201ENST00000507042 360 ntBASIC17.42■□□□□ 0.38
CHI3L1P36222 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.42■□□□□ 0.38
CHI3L1P36222 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.42■□□□□ 0.38
CHI3L1P36222 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.42■□□□□ 0.38
CHI3L1P36222 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.42■□□□□ 0.38
CHI3L1P36222 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.42■□□□□ 0.38
CHI3L1P36222 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHI3L1P36222 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 GPAT2P1-201ENST00000444924 1672 ntBASIC17.42■□□□□ 0.38
CHI3L1P36222 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CHI3L1P36222 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHI3L1P36222 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.41■□□□□ 0.38
CHI3L1P36222 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.41■□□□□ 0.38
CHI3L1P36222 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 MIR564-202ENST00000385049 94 ntBASIC17.41■□□□□ 0.38
CHI3L1P36222 AP000593.1-201ENST00000393668 712 ntBASIC17.41■□□□□ 0.38
CHI3L1P36222 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.41■□□□□ 0.38
CHI3L1P36222 KRT18P41-201ENST00000518924 1277 ntBASIC17.41■□□□□ 0.38
CHI3L1P36222 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.41■□□□□ 0.38
CHI3L1P36222 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.41■□□□□ 0.38
CHI3L1P36222 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.41■□□□□ 0.38
CHI3L1P36222 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHI3L1P36222 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.41■□□□□ 0.38
CHI3L1P36222 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.41■□□□□ 0.38
CHI3L1P36222 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHI3L1P36222 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHI3L1P36222 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHI3L1P36222 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHI3L1P36222 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHI3L1P36222 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.4■□□□□ 0.38
CHI3L1P36222 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHI3L1P36222 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHI3L1P36222 AC068880.1-201ENST00000507289 2297 ntBASIC17.4■□□□□ 0.38
CHI3L1P36222 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.4■□□□□ 0.38
CHI3L1P36222 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHI3L1P36222 ABHD17AP1-201ENST00000358206 933 ntBASIC17.4■□□□□ 0.38
CHI3L1P36222 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.4■□□□□ 0.38
CHI3L1P36222 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.4■□□□□ 0.38
CHI3L1P36222 CRYGFP-201ENST00000418459 633 ntBASIC17.4■□□□□ 0.38
CHI3L1P36222 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms