Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.64■□□□□ 0.41
PTX3P26022 AC104390.1-201ENST00000555663 520 ntBASIC17.64■□□□□ 0.41
PTX3P26022 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTX3P26022 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTX3P26022 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTX3P26022 ABALON-201ENST00000629058 1903 ntBASIC17.64■□□□□ 0.41
PTX3P26022 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTX3P26022 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTX3P26022 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTX3P26022 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.64■□□□□ 0.41
PTX3P26022 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTX3P26022 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.64■□□□□ 0.41
PTX3P26022 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTX3P26022 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.63■□□□□ 0.41
PTX3P26022 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.63■□□□□ 0.41
PTX3P26022 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.63■□□□□ 0.41
PTX3P26022 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
PTX3P26022 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.63■□□□□ 0.41
PTX3P26022 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 MIR149-201ENST00000384879 89 ntBASIC17.63■□□□□ 0.41
PTX3P26022 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.63■□□□□ 0.41
PTX3P26022 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.63■□□□□ 0.41
PTX3P26022 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.63■□□□□ 0.41
PTX3P26022 MIR3180-4-201ENST00000582223 153 ntBASIC17.63■□□□□ 0.41
PTX3P26022 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.63■□□□□ 0.41
PTX3P26022 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
PTX3P26022 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.63■□□□□ 0.41
PTX3P26022 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.63■□□□□ 0.41
PTX3P26022 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTX3P26022 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PTX3P26022 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTX3P26022 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PTX3P26022 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.62■□□□□ 0.41
PTX3P26022 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.62■□□□□ 0.41
PTX3P26022 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.62■□□□□ 0.41
PTX3P26022 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 AC087499.1-201ENST00000418141 1075 ntBASIC17.62■□□□□ 0.41
PTX3P26022 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.62■□□□□ 0.41
PTX3P26022 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.62■□□□□ 0.41
PTX3P26022 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.62■□□□□ 0.41
PTX3P26022 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.62■□□□□ 0.41
PTX3P26022 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.62■□□□□ 0.41
PTX3P26022 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTX3P26022 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.62■□□□□ 0.41
PTX3P26022 AC009102.3-201ENST00000623118 1491 ntBASIC17.62■□□□□ 0.41
PTX3P26022 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTX3P26022 GMCL1P1-201ENST00000463439 1581 ntBASIC17.62■□□□□ 0.41
PTX3P26022 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTX3P26022 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTX3P26022 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PTX3P26022 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.61■□□□□ 0.41
PTX3P26022 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.61■□□□□ 0.41
PTX3P26022 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.61■□□□□ 0.41
PTX3P26022 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.61■□□□□ 0.41
PTX3P26022 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.61■□□□□ 0.41
PTX3P26022 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTX3P26022 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.61■□□□□ 0.41
PTX3P26022 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTX3P26022 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTX3P26022 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.61■□□□□ 0.41
PTX3P26022 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.61■□□□□ 0.41
PTX3P26022 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.61■□□□□ 0.41
PTX3P26022 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.61■□□□□ 0.41
PTX3P26022 NEK4P2-201ENST00000580004 1012 ntBASIC17.61■□□□□ 0.41
PTX3P26022 AC145285.6-201ENST00000604632 637 ntBASIC17.61■□□□□ 0.41
PTX3P26022 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTX3P26022 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms