Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX1P22670 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RFX1P22670 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX1P22670 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFX1P22670 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFX1P22670 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.02■□□□□ 0.79
RFX1P22670 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RFX1P22670 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RFX1P22670 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.01■□□□□ 0.79
RFX1P22670 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.01■□□□□ 0.79
RFX1P22670 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX1P22670 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX1P22670 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX1P22670 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.01■□□□□ 0.79
RFX1P22670 FAM86EP-206ENST00000510506 987 ntBASIC20.01■□□□□ 0.79
RFX1P22670 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.01■□□□□ 0.79
RFX1P22670 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX1P22670 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RFX1P22670 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX1P22670 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20■□□□□ 0.79
RFX1P22670 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20■□□□□ 0.79
RFX1P22670 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20■□□□□ 0.79
RFX1P22670 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RFX1P22670 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20■□□□□ 0.79
RFX1P22670 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20■□□□□ 0.79
RFX1P22670 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RFX1P22670 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20■□□□□ 0.79
RFX1P22670 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20■□□□□ 0.79
RFX1P22670 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20■□□□□ 0.79
RFX1P22670 CLEC4GP1-201ENST00000596555 870 ntBASIC20■□□□□ 0.79
RFX1P22670 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20■□□□□ 0.79
RFX1P22670 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RFX1P22670 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RFX1P22670 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RFX1P22670 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX1P22670 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20■□□□□ 0.79
RFX1P22670 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX1P22670 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RFX1P22670 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX1P22670 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.99■□□□□ 0.79
RFX1P22670 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.99■□□□□ 0.79
RFX1P22670 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.99■□□□□ 0.79
RFX1P22670 AC007663.1-201ENST00000438948 1240 ntBASIC19.99■□□□□ 0.79
RFX1P22670 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.99■□□□□ 0.79
RFX1P22670 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX1P22670 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RFX1P22670 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RFX1P22670 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.99■□□□□ 0.79
RFX1P22670 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX1P22670 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX1P22670 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RFX1P22670 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFX1P22670 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.98■□□□□ 0.79
RFX1P22670 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RFX1P22670 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX1P22670 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms