Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYN1P17600 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYN1P17600 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYN1P17600 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SYN1P17600 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYN1P17600 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYN1P17600 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.93■□□□□ 0.78
SYN1P17600 KRT8P50-201ENST00000562022 1438 ntBASIC19.93■□□□□ 0.78
SYN1P17600 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYN1P17600 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 GABARAPL3-202ENST00000624044 1851 ntBASIC19.92■□□□□ 0.78
SYN1P17600 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SYN1P17600 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.92■□□□□ 0.78
SYN1P17600 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.92■□□□□ 0.78
SYN1P17600 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.92■□□□□ 0.78
SYN1P17600 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.92■□□□□ 0.78
SYN1P17600 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.92■□□□□ 0.78
SYN1P17600 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.92■□□□□ 0.78
SYN1P17600 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SYN1P17600 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYN1P17600 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.91■□□□□ 0.78
SYN1P17600 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SYN1P17600 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.91■□□□□ 0.78
SYN1P17600 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.91■□□□□ 0.78
SYN1P17600 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SYN1P17600 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 AC092865.6-201ENST00000642101 219 ntBASIC19.91■□□□□ 0.78
SYN1P17600 AC125634.1-201ENST00000438758 1403 ntBASIC19.91■□□□□ 0.78
SYN1P17600 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.91■□□□□ 0.78
SYN1P17600 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.91■□□□□ 0.78
SYN1P17600 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYN1P17600 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.9■□□□□ 0.78
SYN1P17600 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.9■□□□□ 0.78
SYN1P17600 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.9■□□□□ 0.78
SYN1P17600 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 LAGE3P1-201ENST00000425356 484 ntBASIC19.9■□□□□ 0.78
SYN1P17600 AC108751.1-201ENST00000490852 363 ntBASIC19.9■□□□□ 0.78
SYN1P17600 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.9■□□□□ 0.78
SYN1P17600 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.9■□□□□ 0.78
SYN1P17600 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.9■□□□□ 0.78
SYN1P17600 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.9■□□□□ 0.78
SYN1P17600 AL078644.1-201ENST00000609881 752 ntBASIC19.9■□□□□ 0.78
SYN1P17600 AC093028.1-201ENST00000622998 982 ntBASIC19.9■□□□□ 0.78
SYN1P17600 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SYN1P17600 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 Z98044.1-201ENST00000632503 1764 ntBASIC19.9■□□□□ 0.78
SYN1P17600 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SYN1P17600 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.9■□□□□ 0.78
SYN1P17600 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYN1P17600 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
SYN1P17600 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
SYN1P17600 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms