Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
NCK1P16333 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NCK1P16333 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCK1P16333 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
NCK1P16333 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.39■□□□□ 0.38
NCK1P16333 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NCK1P16333 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.39■□□□□ 0.37
NCK1P16333 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.39■□□□□ 0.37
NCK1P16333 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.39■□□□□ 0.37
NCK1P16333 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.39■□□□□ 0.37
NCK1P16333 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.39■□□□□ 0.37
NCK1P16333 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NCK1P16333 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.39■□□□□ 0.37
NCK1P16333 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 HTR7P1-201ENST00000538670 1336 ntBASIC17.39■□□□□ 0.37
NCK1P16333 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.39■□□□□ 0.37
NCK1P16333 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.39■□□□□ 0.37
NCK1P16333 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
NCK1P16333 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
NCK1P16333 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.39■□□□□ 0.37
NCK1P16333 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.39■□□□□ 0.37
NCK1P16333 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCK1P16333 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.38■□□□□ 0.37
NCK1P16333 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
NCK1P16333 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.38■□□□□ 0.37
NCK1P16333 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NCK1P16333 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NCK1P16333 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.38■□□□□ 0.37
NCK1P16333 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.38■□□□□ 0.37
NCK1P16333 PRSS44-201ENST00000515154 1146 ntBASIC17.38■□□□□ 0.37
NCK1P16333 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.38■□□□□ 0.37
NCK1P16333 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.38■□□□□ 0.37
NCK1P16333 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.38■□□□□ 0.37
NCK1P16333 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.38■□□□□ 0.37
NCK1P16333 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NCK1P16333 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 SIRPAP1-201ENST00000448467 1770 ntBASIC17.38■□□□□ 0.37
NCK1P16333 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NCK1P16333 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NCK1P16333 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.37■□□□□ 0.37
NCK1P16333 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NCK1P16333 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NCK1P16333 PKD1P1-201ENST00000458669 6805 ntBASIC17.37■□□□□ 0.37
NCK1P16333 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
NCK1P16333 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.37■□□□□ 0.37
NCK1P16333 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NCK1P16333 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NCK1P16333 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.37■□□□□ 0.37
NCK1P16333 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.37■□□□□ 0.37
NCK1P16333 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.37■□□□□ 0.37
NCK1P16333 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.37■□□□□ 0.37
NCK1P16333 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.37■□□□□ 0.37
NCK1P16333 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms