Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.16■□□□□ 0.98
BMP3P12645 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.16■□□□□ 0.98
BMP3P12645 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.16■□□□□ 0.98
BMP3P12645 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.16■□□□□ 0.98
BMP3P12645 AL732292.2-201ENST00000609649 430 ntBASIC21.16■□□□□ 0.98
BMP3P12645 AL121772.3-201ENST00000610840 674 ntBASIC21.16■□□□□ 0.98
BMP3P12645 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
BMP3P12645 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
BMP3P12645 LINC01126-201ENST00000623515 1646 ntBASIC21.15■□□□□ 0.98
BMP3P12645 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.15■□□□□ 0.98
BMP3P12645 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.15■□□□□ 0.98
BMP3P12645 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 AL845331.1-201ENST00000424978 1190 ntBASIC21.15■□□□□ 0.98
BMP3P12645 IGHV3-47-201ENST00000425060 335 ntBASIC21.15■□□□□ 0.98
BMP3P12645 VENTXP7-201ENST00000475503 772 ntBASIC21.15■□□□□ 0.98
BMP3P12645 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
BMP3P12645 AC091607.1-201ENST00000490318 1060 ntBASIC21.15■□□□□ 0.98
BMP3P12645 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 AC011840.4-201ENST00000578471 627 ntBASIC21.15■□□□□ 0.98
BMP3P12645 AP005901.3-202ENST00000581653 237 ntBASIC21.15■□□□□ 0.98
BMP3P12645 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
BMP3P12645 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.15■□□□□ 0.98
BMP3P12645 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.15■□□□□ 0.98
BMP3P12645 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
BMP3P12645 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 AL031598.1-201ENST00000561511 1773 ntBASIC21.15■□□□□ 0.98
BMP3P12645 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
BMP3P12645 AC120498.9-201ENST00000339021 3867 ntBASIC21.15■□□□□ 0.98
BMP3P12645 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.15■□□□□ 0.98
BMP3P12645 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BMP3P12645 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BMP3P12645 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BMP3P12645 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BMP3P12645 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
BMP3P12645 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.14■□□□□ 0.97
BMP3P12645 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.14■□□□□ 0.97
BMP3P12645 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 AC246785.2-201ENST00000432512 513 ntBASIC21.14■□□□□ 0.97
BMP3P12645 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
BMP3P12645 AC091304.2-201ENST00000564639 760 ntBASIC21.14■□□□□ 0.97
BMP3P12645 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 IFNL4P1-201ENST00000607083 540 ntBASIC21.14■□□□□ 0.97
BMP3P12645 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.14■□□□□ 0.97
BMP3P12645 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.14■□□□□ 0.97
BMP3P12645 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.14■□□□□ 0.97
BMP3P12645 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
BMP3P12645 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BMP3P12645 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
BMP3P12645 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
BMP3P12645 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
BMP3P12645 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 AC026396.1-201ENST00000419388 421 ntBASIC21.13■□□□□ 0.97
BMP3P12645 TSPY12P-201ENST00000421279 868 ntBASIC21.13■□□□□ 0.97
BMP3P12645 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.13■□□□□ 0.97
BMP3P12645 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.13■□□□□ 0.97
BMP3P12645 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.13■□□□□ 0.97
BMP3P12645 AC099336.1-202ENST00000602961 463 ntBASIC21.13■□□□□ 0.97
BMP3P12645 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
BMP3P12645 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.13■□□□□ 0.97
BMP3P12645 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BMP3P12645 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.13■□□□□ 0.97
BMP3P12645 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms